Cloud Storage Workspace

I'm not sure if I'm posting this in the right area. It does have to do with Java Eclipse.

I've been using a program called Syncdocs Portable to sync my Google Drive folder to a USB flash drive. This way I always have my cloud on me.

Only problem is, I have my Eclipse workspace on my cloud drive. As I go from computer to computer with my flash drive, it seems that the metadata folder is constantly changing and syncing.

I am not exactly too sure why that folder is changing so much when I'm writing code.

And so that's why I am here to ask:

Do you guys see any problems with working like this? It hasn't been a problem...until recently I tried going on my work computer to work on some homework and an error from Eclipse came up saying a certain resource folder in the metadata directory was missing!

The problem was only on that one computer though...

Should I continue with this practice or do you guys foresee more problems for me in the future?

Thanks guys.